PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_5BL_F367A99A7.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 285aa    MW: 30391.6 Da    PI: 5.7192
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_5BL_F367A99A7.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_140.36.7e-1397148556
                            CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                            +  rrkq+NRe+ArrsR RK a + eLe  v +L  eN++L  +l   ++++
  Traes_5BL_F367A99A7.1  97 RLRRRKQSNRESARRSRSRKAAHLNELEAQVSQLRVENSSLLRRLADVNQKY 148
                            5679*************************************99998877766 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.0E-1893157IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.43895149IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.7E-1095148No hitNo description
SuperFamilySSF579591.0E-997148No hitNo description
PfamPF001701.9E-1097147IPR004827Basic-leucine zipper domain
PfamPF124987.1E-45164278IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    Send to blast
MWRASGAMPP ERFAASPSLP NADVQHIGTI NPIGGKVVPV QNKLAVGASG MSGPHLVQNA  60
DALVKQAASS SSREQSEDDD MEGEDEITGN GVPTDQRLRR RKQSNRESAR RSRSRKAAHL  120
NELEAQVSQL RVENSSLLRR LADVNQKYNG AAVDNRVLKA DVETLRAKVK MAEDSVKRVT  180
GMSALFPAGS DMSSLSMPFT GSPSEATSDA AVPDDLSAYF STSEAGGNNG YMPEMASSAQ  240
EDDNFLNEAM DTGKMGRPDS LHRVASLEHL QQRMCGGPAS SGSTS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3606030.0AK360603.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv1121N05.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003557420.11e-153PREDICTED: light-inducible protein CPRF2-like
SwissprotQ990901e-47CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBLW5FKB80.0W5FKB8_WHEAT; Uncharacterized protein
STRINGMLOC_69270.11e-156(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP34883878
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.11e-33bZIP family protein
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]